These Healthy Banana Muffins are a great snack for kids because they’re sweetened only with fruit and they’re full of vegetables and whole grains! They’re the perfect healthy snack for on-the-go and they make a great addition to healthy school lunches.

Estimated reading time: 10 minutes
Not all muffins are created equally, and these Healthy Banana Muffins are on the opposite end of the spectrum from those bakery-style cake-like muffins that are basically dessert. These healthy muffins are made with shredded veggies, mashed bananas, and whole grains, and they’re refined sugar-free, making them a super wholesome and nutritious snack that will keep you satisfied. If you’re looking for a healthy alternative to a conventional muffin that’s diabetic friendly, great for young kids, or perfect for anyone on a low-sugar diet, these healthy banana muffins are the recipe you need!
There are so many reasons why we LOVE these healthy muffins for kids! Here are just a few:
- They are full of HEALTHY INGREDIENTS – These healthy banana muffins are packed with shredded vegetables and sweetened with fruit. They contain tons of fibre and healthy whole grains.
- They are SUGAR FREE – There is no refined sugar in these healthy muffins and they get their sweetness from bananas. This makes them a perfect healthy option for babies or toddlers, or anyone on a sugar-free diet.
- They make the BEST SNACK – These muffins are a great snack for kids and adults alike, and a great healthy option for school lunches, since they don’t contain nuts or many other common allergens.
- They are EASY to make – The muffin batter comes together in one bowl and bakes to perfection.

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Try these tips to make the BEST sugar free muffins you’ve ever made!
Read the recipe in its entirety before you begin and make sure you have all the ingredients. You can even measure out the ingredients in advance before you combine them. This can help you measure accurately.
It is important to bake your muffins right after you mix them since mixing the wet and dry ingredients activates the leavening agent. Preheat your oven first so you don’t have to wait for it to heat up after you’ve mixed. This will help the muffins bake up nice and fluffy.
Liquid should be measured in a liquid measuring cup, NOT a measuring cup used for dry ingredients like flour or sugar. Measuring the liquid correctly can prevent you from adding too much, which makes the muffins dense and heavy.
You might be tempted to substitute some of the grated veggies for fruit or add raisins or nuts, but be careful not to make too many changes to the recipe. Adding up to 3/4 cup of add-ins is fine, but substituting ingredients might change the outcome of the recipe as different ingredients have different levels of moisture.
When mixing your dry and wet ingredients together, mix only until the flour disappears (about 8-10 turns of mixing spoon when mixing by hand). This helps the muffins stay fluffy and soft, and prevents tunnelling (large holes left from bubbles in the batter).
If you want your muffins to bake evenly, divide the batter as evenly as you can between the muffin cups.
Resist the urge to eat your muffins hot from the oven. Letting them cool for several minutes (10 minutes or more is best) will help them keep their shape and texture – muffins actually continue baking on the inside for several minutes after they’ve been removed from the oven.

If you are having trouble with this healthy banana muffin recipe, follow the solutions we recommend below.
Over-mixing can lead to dense muffins. Make sure to fold the wet and dry ingredients together just until the flour has disappeared.
These muffins will be more moist due to the veggies and fruit and no sugar but if they are too moist, it could be due to excess liquid from the zucchini, or excess liquid from using frozen bananas. We recommend using fresh brown bananas for this recipe, as frozen bananas, when thawed, have extra liquid that needs to be strained out before use. If the batter is too wet, then an extra few tablespoons of rolled oats or flour can absorb some of the extra liquid.
The muffins can become too dry and break apart when they are baked for too long or if the dry ingredients haven’t been measure properly. Make sure to check at the 15 minute mark and watch for the gold brown tops to tell when the muffins are done.
Let the muffins cool completely to room temperature before trying to store them. This will prevent them from becoming soggy, as they give off heat in a closed container.
When the oven is not preheated, the cold oven will cause the muffins to bake unevenly. Make sure to preheat the oven first before adding the muffins.
Sugar-free muffins can end up being bland, so make sure to add in the veggies and fruit mentioned in the recipe to give the flavour to the muffins. Don’t forget the salt, either – the salt helps bring out the natural sweetness of the fruit.

You’ll need these kitchen items on hand to make these healthy banana muffins (paid links):
- mixing bowls
- 24-cup muffin tin
- measuring cups and spoons
- Silicone Spatula
- wooden spoon
- Grater
- Cooling Racks
- liquid measuring cups

To make these sugar free muffins you will need these ingredients on hand (paid links):
- 1 cup whole wheat flour
- 1/2 cup rolled oats
- 1 teaspoon baking soda
- 1/2 teaspoon salt
- 2 eggs
- 1 large carrot approximately 3/4 cup grated
- 1/2 cup grated zucchini
- 1/2 cup grated apple
- 1/4 cup canola oil
- 3 mashed bananas (approximately 3/4 cup) or 2 mashed bananas and 1/4 cup unsweetened applesauce
Try these simple variations on Toddler muffins!
- Cinnamon or Nutmeg – Add cinnamon or nutmeg in to the batter for additional flavour and make a streusel topping made of rolled oats, coconut oil, and cinnamon.
- Blueberry Oat – Add 1/2 cup fresh blueberries and lemon zest to the batter and sprinkle oats on top before baking .
- Almond butter or natural peanut butter – Add in a few tablespoons of nut butter for added protein.

Time needed: 30 minutes
Follow these steps to make the BEST Healthy Muffins for Kids!
- Preheat oven and grease pan.
Preheat your oven to 350 degrees Fahrenheit (175 degrees Celsius) and grease a 24-cup mini muffin tin (or line a 12-cup muffin tin with paper muffin liners).
- Mix dry ingredients.
Add the whole wheat flour, rolled oats, baking soda, and salt to a large bowl and whisk to combine.
- Whisk together wet ingredients.
Mash the ripe bananas. Into a large liquid measuring cup, add the eggs and whisk them with a fork to break up the yolks. Add the canola oil, the grated carrot, the grated zucchini, grated apple, and the mashed ripe bananas, then mix with a spoon until all the wet ingredients are combined.
- Combine wet and dry ingredients.
Pour the wet ingredients into the bowl with the dry ingredients and fold everything together using a spatula just until no streaks of flour remain.
- Spoon batter into the muffin pan.
Drop about a tablespoon of the muffin batter into each of the prepared mini muffin cups and bake at 350 degrees Fahrenheit (175 degrees Celsius) for about 18-22 minutes or until the muffins are a nice golden brown. If using a larger muffin tin, divide the batter evenly between the 12 muffin cups. (See the “Notes” section at the end of the recipe card for baking time.)
- Let them cool.
Remove the muffins from the oven and from their tin and let them cool completely on a cooling rack before enjoying!
- Enjoy the muffins.
This recipe makes about 24 mini muffins or 12 regular sized muffins.

How do I store these healthy banana muffins?
Most muffins are best enjoyed the day they’re made, but they will last for up to 3 days when stored at room temperature in an airtight container. They stay freshest in the fridge or freezer since they are made almost entirely of fruit and vegetables. Be sure to thaw them at room temperature before enjoying.
Can I freeze these toddler muffins?
Yes, you can freeze these healthy banana muffins. They stay best in the freezer in an airtight container or plastic freezer bag since they are made with fruit and veggies. Store in small batches and grab as you go. Store them in the freezer for up to 2 months for optimum freshness.
How long do I bake these sugar free muffins if I make them regular sized?
If you want to make this recipe in regular sized muffin tins, you should bake them at 350 degrees Fahrenheit (175 degrees Celsius) for 32-35 minutes or until they are golden brown on top and a toothpick comes out fairly clean.
How to defrost homemade sugar free muffins?
When defrosting muffins, remove the lid from the container they were stored in so any liquid can evaporate as they defrost. Let them come to room temperature before enjoying.
Why are the healthy banana muffins so moist?
These muffins are very moist because they contain a lot of fruit and vegetables (because they are made for toddlers and people who are limiting their intake of refined sugars). Therefore, they are softer and more moist than normal muffins that contain high amounts of sugar.
Can I add nuts or chocolate chips to these healthy banana muffins?
It’s possible to add up to 3/4 cup of add-ins like chocolate chips or chopped walnuts or pecans to this recipe, but we don’t recommend adding more than 3/4 cup. If you do add nuts, be sure to stir them into the batter gently right before baking.
Can I add Greek yogurt to this healthy banana muffin recipe?
We don’t recommend adding any Greek yogurt, as there is already enough moisture from the mashed bananas and other fruits and veggies.
These muffins taste bland. Can I add more flavour?
Yes! Feel free to add some vanilla extract, cinnamon, or even nutmeg for flavour.
Are these healthy banana muffins gluten-free and dairy-free?
Yes, these muffins are dairy-free, but because they contain whole wheat flour they are not gluten-free. To make them gluten-free, simply substitute the whole wheat flour for gluten-free oat flour. We don’t recommend using other gluten-free flour (like almond flour) in this recipe as it will affect the outcome of the recipe significantly. You can also use white whole wheat flour in this recipe.
Can I use a different oil instead of vegetable oil in this recipe?
Yes, feel free to substitute the vegetable oil with avocado oil, melted coconut oil, or even melted butter.
Do I need to add a sweetener to this recipe?
No need to add honey or maple syrup as these muffins are sweet enough with the added fruit.
We hope you enjoy this recipe for Toddler Muffins! Let us know in the comments below, what’s your kids’ favourite healthy snack? We’d love to know!
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Watch the video below to see exactly how we make this recipe. You can find more delicious recipe videos on our YouTube channel.
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Healthy Banana Muffins

Recipe: Equipment
Recipe: Ingredients
- 1 cup whole wheat flour
- 1/2 cup rolled oats
- 1 teaspoon baking soda
- 1/2 teaspoon salt
- 2 eggs
- 1 large carrot approximately 3/4 cup grated
- 1/2 cup zucchini grated
- 1/2 cup apple grated
- 1/4 cup canola oil
- 3 mashed bananas (approximately 3/4 cup) or 2 mashed bananas and 1/4 cup unsweetened applesauce
Recipe: Instructions
- Preheat your oven to 350 degrees Fahrenheit (175 degrees Celsius) and grease a 24-cup mini muffin tin.
- Add the whole wheat flour, rolled oats, baking soda, and salt to a large bowl and whisk to combine.
- To a large liquid measuring cup, add the eggs and whisk them with a fork to break up the yolks. Add the canola oil, the grated carrot, the grated zucchini, grated apple, and the mashed bananas and mix with a spoon until all the wet ingredients are combined.
- Pour the wet ingredients into the bowl with the dry ingredients and fold everything together using a rubber spatula just until no streaks of flour remain.
- Drop about a tablespoon of the muffin batter into each of the prepared mini muffin cups and bake at 350 degrees Fahrenheit (175 degrees Celsius) for about 18-22 minutes or until the muffins are a nice golden brown.
- Remove them from the oven and from their tin and let them cool completely on a cooling rack before enjoying!
Recipe: Notes
A Note about Flavour
To make these muffins more flavourful, add a teaspoon of vanilla extract to the wet ingredients and a teaspoon of cinnamon to the dry ingredients before mixing the batter. If making them for a baby or toddler, feel free to leave out these flavourful ingredients.Freezer Instructions
Store in an airtight container or plastic freezer bag. Store them in the freezer for up to 2 months for optimum freshness.Storage Instructions
Most muffins are best enjoyed the day they’re made, but they last for up to 3 days when stored at room temperature in an airtight container. They stay freshest in the fridge or freezer since they are made almost entirely of fruit and vegetables.Recipe: Nutrition
Notice: Nutrition is auto-calculated, using Spoonacular, for your convenience. Where relevant, we recommend using your own nutrition calculations.
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So I just made these and they have an omelet texture. Should they be more dense? I have them stored in my fridge for now. I shouldn’t have any issue with placing them back in the oven tomorrow if I need to, right?
I’m sorry the texture was off for you…they definitely shouldn’t have an omelette texture. It sounds like the measurements may have been off a little bit. 🙁
These look great! Do you think I could add some chia/flax/pumpkin seeds for some extra fiber? Or would I need to add extra liquids as well? Thanks!
I think if you added only a few tablespoons it shouldn’t affect the batter too much. This recipe is pretty forgiving 🙂 Enjoy!
Hi there . .. my daughter is sugar restricted . .. even in fruit so do you think I could use some avocado to reduce the bananas to 2 bananas? Also would flaxseed work as an egg substitute??
Thanks!!
I’ve never substituted the egg in this recipe, but you could probably make both those substitutions successfully. This is a very forgiving recipe 🙂 Give it a try and let me know how it goes!
Excellent! Replaced the canola oil with coconut oil and added some cinnamon:)
So glad you liked the recipe!!
Gluten free version?
I’ve never made these with gluten-free flour so I can’t say exactly what would work, but if you have a reliable one you use I’m sure it would work. Another option would be to try oat flour. Good luck!
Hi. I use 0.5 cup of normal gluten free flour and 0.5 cup of buckweat flour. The muffins are slightly sticking to the paper, but it doesn’t matter. My 3.5 year old loves them and ask for them on regular basis …. and daddy keeps helping himself as well :-).
Great recipe, thanks
Thanks so much for taking the time to leave a comment! I’m glad you enjoyed the recipe!
Thanks for this recipe. Can’t wait to make these.
You’re welcome!Let me know how you liked them!
You’re welcome.Let me know how you like them!
Thank you for this! I so appreciate finding a healthy recipe that doesn’t just use honey or maple syrup instead of sugar!! My almost two-year old twin toddlers LOVE them. I added cinnamon & vanilla and went with coconut oil – they came out super delicious! Thanks!!
I’m so glad you and your kids loved them! Thanks for the feedback! 🙂
I only have 2 bananas. Could I do 1/2 Cup of applesauce instead of 1/4 Cup, to make up for it? What would you recommend? Thanks!
You could try that, however since I haven’t done it myself I can’t say exactly whether or not it would work!
Is there a substitute for the canola oil? I saw replacing it with applesauce, but what other oil can I use?
Yes! Feel free to use any oil you wish: any neutral-tasting vegetable oil would work, and melted coconut oil works great too!
Followed the recipe except that I didn’t add any salt (used sodium bicarbonate, salty enough), and it’s perfect! Cooked a tiny bit longer (20 minutes) as I didn’t squeeze the water out of the veggies, it turned out perfectly moist but not mushy, and my 15 months old daughter loved it! Kept a few in the fridge and froze a batch, will surely redo the recipe regularly!
Thank you for sharing this, will check your other recipes 🙂
Thank you for your feedback! My kids love them too ☺️
Hi! I didn’t have any canola oil or other neutral-tasting oil so I used the equivalent measurement of full-fat greek yogurt. It worked really well! Thanks for the recipe!
Great substitution! This recipe is incredibly forgiving, and I’m glad it worked so well for you! Thanks!
The idea is nice, but as a busy Mom it took me quite awhile to actually find your recipe. This webpage is covered in too many ads and promotional items. Maybe put the recipe at the top?
Thanks so much for your feedback Jessica. I completely understand your concerns, however because I offer all my recipes for free to my readers the ads on my blog provide me with the revenue required to continue offering my readers recipes free of charge. I will definitely take your feedback into account, however, as I regularly monitor and manage the ads and ad placement on my site. Cheers!
I agree. Your site has way too many ads. I had to scroll through twice to be able to find the recipe.
Thanks for your comment Beth. While I appreciate your feedback, I offer my recipes for free which means the ads on my blog are necessary in order to allow me to keep offering my readers 3 free recipes each week. My recipes are always found in the same place, right at the end of the blog post in a big yellow box.
Hi Christine
Don’t worry about the ads. People have to learn to get over it. If we want no ads then we should be buying cook books. Thank you for this recipe it’s on the oven now. With everything currently going on it was very difficult to find wheat flour organic or otherwise so I added a ground superseed blend hoping that ads some bulk to the organic all purpose flour. Seems like a great recipe though can’t wait to see how it comes out!!!! Thank you for the great recipes.
Thank you!! Yes, I totally agree with you, but not everyone knows that. Hope the recipe turned out delicious!🙂
Is it 4 cup mashed bananas or 4 mashed bananas? Thanks
It’s 4 mashed bananas, or 3 mashed bananas and applesauce 🙂
How many cups approximately does 1 large carrot grated yield?
about 2/3 cup to 3/4 cup is what I usually use 🙂
Thanks for posting a recipe that actually has healthy ingredients! I’ve been looking for healthy muffin recipes for my toddler and keep coming across recipes that include a cup or more of sugar, white flour, etc., and are being titled “Healthy”.
You’re welcome! So glad you like them!
I make these once a week. My daughter thinks they’re cupcakes and my husband and I shovel them down as well. You wouldn’t have any clue that there’s no sugar in them. Score!
Love this! So glad you like them!! 🙂
This is the second time I’ve made them and each time they like don’t get done in the middle! I don’t know what I’m doing wrong!
Are you by any chance baking them in regular sized muffin tins? If yes, you should bake them for 32-35 minutes at 350 Fahrenheit. I hope this helps. Happy baking ☺️
I’m trying to add a little extra fat to my toddlers diet. Do you think I could add peanut butter to these?
Yes, you probably could! A good start might be to add half the amount of applesauce and replace half the applesauce with peanut butter. Good luck!
Do you think I could use an equal amount of applesauce instead of the oil??
Yes, you could definitely use applesauce, just use about a tablespoon less applsauce than the amount of oil the recipe calls for. Hope you enjoy the muffins!
Is there anything I can switch out instead of canola oil like olive oil or coconut oil or more applesauce?
Coconut oil will work perfectly.
Could this be made into a cake?
Yes, but you’d have to adjust the baking time!
I just made this and they were delicious! I added cinnamon, too.
That's great! Cinnamon would be a great addition!
Would quick oats work with this recipe instead of rolled oats??
Yes, absolutely! I've used quick oats as well and they work great!
It's always great to have a healthy "treat" recipe that you can make and the kids love! I'd enjoy these muffins too!
Yes! I enjoy these almost as much as my kids do!
Do you recommend squeezing the water out of the zucchini?
If you’re using frozen and thawed zucchini than yes.
The recipe mentions apple but there is no apple in the instructions. Should it be included?
The grated apple gets added with the grated veggies.
The store was actually OUT of zucchini the other day. What would you use to replace that in this recipe if needed (I mean, I like zucchini in baking too, but disparate times…) another cup of carrot?
Also, how long would you bake it for all regular sized muffins?
Great questions! I'm sure it would work with another cup of grated carrot, but grated apple might also work since it has a similar water content to zucchini (and it would increase the sweetness of the muffins too). As for baking time for larger muffins, start by adding 3-5 minutes to the baking time and go from there (I'd say no more that 5-7 minutes more, but it will depend on your oven). As soon as the tops develop that golden colour and spring back to the touch, they're done! I hope you and your kiddos enjoy this recipe!
I also didn’t have Zuc. the first time I did this recipe and I ended up replacing it with beet and a bit of apple sauce (maybe a half cup or less). It worked out well and also had even more nutrients! Baby loved them. I’m actually doing them like that again now! 🙂
Thanks for the feedback Jenna!!🙂
I used 1/2 cup (same measurement) of pumpkin puree. It was wonderful.